Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 HLA-G-202ENST00000376815 851 ntBASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 HLA-G-203ENST00000376818 1127 ntBASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 AC098934.4-201ENST00000564127 592 ntBASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB13Q9Y5F0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 AC099778.1-201ENST00000568593 1911 ntBASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
PCDHB13Q9Y5F0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB13Q9Y5F0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
PCDHB13Q9Y5F0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 BX119927.1-201ENST00000636596 1552 ntBASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB13Q9Y5F0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 AC083880.1-201ENST00000608266 535 ntBASIC22.06■■□□□ 1.12
PCDHB13Q9Y5F0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms