Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.77■■□□□ 1.08
NUB1Q9Y5A7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.77■■□□□ 1.08
NUB1Q9Y5A7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.77■■□□□ 1.08
NUB1Q9Y5A7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.76■■□□□ 1.07
NUB1Q9Y5A7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 AL390719.1-204ENST00000412397 1219 ntBASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 GCSHP5-201ENST00000443090 522 ntBASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 RPS2P52-201ENST00000469610 820 ntBASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUB1Q9Y5A7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUB1Q9Y5A7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 AL512408.1-201ENST00000569378 2000 ntBASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NUB1Q9Y5A7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 AC005829.2-201ENST00000571422 1056 ntBASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 AC006557.6-201ENST00000623071 864 ntBASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUB1Q9Y5A7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
NUB1Q9Y5A7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUB1Q9Y5A7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NUB1Q9Y5A7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUB1Q9Y5A7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms