Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
IFT52Q9Y366 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IFT52Q9Y366 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
IFT52Q9Y366 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
IFT52Q9Y366 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 AC087633.2-202ENST00000565166 1439 ntBASIC18.7■□□□□ 0.58
IFT52Q9Y366 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
IFT52Q9Y366 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IFT52Q9Y366 DPP3P2-201ENST00000416030 1696 ntBASIC18.69■□□□□ 0.58
IFT52Q9Y366 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.69■□□□□ 0.58
IFT52Q9Y366 AL356652.1-201ENST00000615962 565 ntBASIC18.69■□□□□ 0.58
IFT52Q9Y366 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.69■□□□□ 0.58
IFT52Q9Y366 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IFT52Q9Y366 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IFT52Q9Y366 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
IFT52Q9Y366 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 TCF3P1-201ENST00000423021 1937 ntBASIC18.67■□□□□ 0.58
IFT52Q9Y366 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 AC018445.3-201ENST00000624177 1945 ntBASIC18.67■□□□□ 0.58
IFT52Q9Y366 CYP21A1P-202ENST00000354927 1481 ntBASIC18.67■□□□□ 0.58
IFT52Q9Y366 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.67■□□□□ 0.58
IFT52Q9Y366 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFT52Q9Y366 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms