Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC113347.1-201ENST00000413321 391 ntBASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 NAPSB-206ENST00000562112 1266 ntBASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AL049597.2-201ENST00000565575 961 ntBASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AL024507.2-201ENST00000606070 2574 ntBASIC31.09■■■□□ 2.57
CDK11AQ9UQ88 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 AC005521.1-201ENST00000393351 872 ntBASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK11AQ9UQ88 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 NT5C-211ENST00000582170 653 ntTSL 3 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK11AQ9UQ88 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 KRT18P22-201ENST00000402024 1347 ntBASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 KRT8P17-201ENST00000453110 1448 ntBASIC31.06■■■□□ 2.56
CDK11AQ9UQ88 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.05■■■□□ 2.56
CDK11AQ9UQ88 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 CYP2D8P-201ENST00000433633 1490 ntBASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 DUT-205ENST00000558813 769 ntTSL 2 BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 AC010947.1-201ENST00000623454 693 ntBASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDK11AQ9UQ88 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 ARMC10P1-201ENST00000313754 855 ntBASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 AL390955.1-201ENST00000428694 934 ntBASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDK11AQ9UQ88 MYB-221ENST00000527615 2381 ntTSL 5 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC31.02■■■□□ 2.56
CDK11AQ9UQ88 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC31.01■■■□□ 2.56
CDK11AQ9UQ88 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms