Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 AC142381.2-201ENST00000566120 298 ntBASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 AC018445.3-201ENST00000624177 1945 ntBASIC18.52■□□□□ 0.56
TMCC3Q9ULS5 LINC02228-203ENST00000641970 1355 ntBASIC18.52■□□□□ 0.55
TMCC3Q9ULS5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMCC3Q9ULS5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.52■□□□□ 0.55
TMCC3Q9ULS5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 BX323043.1-201ENST00000641006 1765 ntBASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 AC091799.1-201ENST00000422823 811 ntBASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 AC243732.1-201ENST00000612648 864 ntBASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 AL020996.1-203ENST00000536896 2307 ntBASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 BX119927.1-201ENST00000636596 1552 ntBASIC18.51■□□□□ 0.55
TMCC3Q9ULS5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 AL691432.2-201ENST00000607222 2038 ntBASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 AC027612.3-201ENST00000413684 1047 ntBASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMCC3Q9ULS5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 RBM17P2-201ENST00000616397 1405 ntBASIC18.49■□□□□ 0.55
TMCC3Q9ULS5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.48■□□□□ 0.55
TMCC3Q9ULS5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMCC3Q9ULS5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.48■□□□□ 0.55
TMCC3Q9ULS5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMCC3Q9ULS5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms