Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 INGX-201ENST00000359239 846 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 B3GAT3P1-201ENST00000471720 806 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 LINC01238-205ENST00000567549 1107 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 AL121894.2-201ENST00000602977 491 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 DGCR10-201ENST00000609839 495 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 AL445675.2-201ENST00000620291 557 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 PTBP1P-201ENST00000554374 1601 ntBASIC25.65■■□□□ 1.7
CCNL1Q9UK58 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
CCNL1Q9UK58 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 C1QL1P1-201ENST00000568105 661 ntBASIC25.64■■□□□ 1.7
CCNL1Q9UK58 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.64■■□□□ 1.7
CCNL1Q9UK58 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCNL1Q9UK58 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.64■■□□□ 1.69
CCNL1Q9UK58 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCNL1Q9UK58 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCNL1Q9UK58 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 AC242852.2-201ENST00000615738 1807 ntBASIC25.63■■□□□ 1.69
CCNL1Q9UK58 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 AC011506.1-201ENST00000474329 610 ntBASIC25.63■■□□□ 1.69
CCNL1Q9UK58 AC128688.1-201ENST00000487626 519 ntBASIC25.63■■□□□ 1.69
CCNL1Q9UK58 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNL1Q9UK58 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 CRYGFP-201ENST00000418459 633 ntBASIC25.62■■□□□ 1.69
CCNL1Q9UK58 AC117947.1-201ENST00000427448 529 ntBASIC25.62■■□□□ 1.69
CCNL1Q9UK58 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 AC097488.1-201ENST00000507834 756 ntBASIC25.62■■□□□ 1.69
CCNL1Q9UK58 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CCNL1Q9UK58 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 MYC-208ENST00000641036 567 ntBASIC25.61■■□□□ 1.69
CCNL1Q9UK58 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CCNL1Q9UK58 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 KRT18P56-201ENST00000507275 550 ntBASIC25.6■■□□□ 1.69
CCNL1Q9UK58 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.6■■□□□ 1.69
CCNL1Q9UK58 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCNL1Q9UK58 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CCNL1Q9UK58 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCNL1Q9UK58 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCNL1Q9UK58 KRT8P20-201ENST00000423953 1409 ntBASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms