Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DUX4Q9UBX2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 AC137761.2-201ENST00000561729 223 ntBASIC17.53■□□□□ 0.4
DUX4Q9UBX2 AC145350.3-201ENST00000569033 163 ntBASIC17.53■□□□□ 0.4
DUX4Q9UBX2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 UBE2DNL-204ENST00000602536 740 ntBASIC17.53■□□□□ 0.4
DUX4Q9UBX2 AC092437.1-201ENST00000624794 1048 ntBASIC17.53■□□□□ 0.4
DUX4Q9UBX2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.53■□□□□ 0.4
DUX4Q9UBX2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 SMG8-203ENST00000578922 2178 ntBASIC17.52■□□□□ 0.4
DUX4Q9UBX2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DUX4Q9UBX2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.52■□□□□ 0.39
DUX4Q9UBX2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DUX4Q9UBX2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DUX4Q9UBX2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
DUX4Q9UBX2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DUX4Q9UBX2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
DUX4Q9UBX2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 PKD1P5-201ENST00000532415 10291 ntBASIC17.49■□□□□ 0.39
DUX4Q9UBX2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUX4Q9UBX2 AC092666.2-201ENST00000613287 246 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms