Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 GPX1P1-201ENST00000388829 606 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 TCF3P1-201ENST00000423021 1937 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 GUSBP6-202ENST00000438529 1198 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 PTBP1P-201ENST00000554374 1601 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 C2orf69P4-201ENST00000565394 541 ntBASIC20.4■□□□□ 0.86
UBP1Q9NZI7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBP1Q9NZI7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBP1Q9NZI7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBP1Q9NZI7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.39■□□□□ 0.86
UBP1Q9NZI7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBP1Q9NZI7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 TSPY6P-201ENST00000448518 926 ntBASIC20.39■□□□□ 0.85
UBP1Q9NZI7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.39■□□□□ 0.85
UBP1Q9NZI7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 AL691432.2-201ENST00000607222 2038 ntBASIC20.38■□□□□ 0.85
UBP1Q9NZI7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBP1Q9NZI7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 SLC29A4P1-201ENST00000398760 971 ntBASIC20.37■□□□□ 0.85
UBP1Q9NZI7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBP1Q9NZI7 BX119927.1-201ENST00000636596 1552 ntBASIC20.37■□□□□ 0.85
UBP1Q9NZI7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.36■□□□□ 0.85
UBP1Q9NZI7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBP1Q9NZI7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.35■□□□□ 0.85
UBP1Q9NZI7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.35■□□□□ 0.85
UBP1Q9NZI7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms