Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 AF186192.3-201ENST00000583427 947 ntBASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 AC005363.2-201ENST00000618631 242 ntBASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDLIM7Q9NR12 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDLIM7Q9NR12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PDLIM7Q9NR12 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 AL137060.1-201ENST00000618151 2648 ntBASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 AC005521.1-201ENST00000393351 872 ntBASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 HTR7P1-201ENST00000538670 1336 ntBASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDLIM7Q9NR12 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDLIM7Q9NR12 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 KRT8P9-201ENST00000558927 1449 ntBASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 AC007225.1-201ENST00000566331 1836 ntBASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.49■■□□□ 1.19
PDLIM7Q9NR12 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 FAM197Y1-201ENST00000421178 764 ntBASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.48■■□□□ 1.19
PDLIM7Q9NR12 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms