Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.7■■□□□ 1.06
NLRC4Q9NPP4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 RARRES2P4-201ENST00000514074 484 ntBASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NLRC4Q9NPP4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 AC006015.1-201ENST00000429970 570 ntBASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NLRC4Q9NPP4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 MCRIP2P1-201ENST00000394346 511 ntBASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.67■■□□□ 1.06
NLRC4Q9NPP4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 PTBP1P-201ENST00000554374 1601 ntBASIC21.66■■□□□ 1.06
NLRC4Q9NPP4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 AL162430.1-201ENST00000480705 870 ntBASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.65■■□□□ 1.06
NLRC4Q9NPP4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms