Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBQLN3Q9H347 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 MIR4651-201ENST00000582622 73 ntBASIC18.54■□□□□ 0.56
UBQLN3Q9H347 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBQLN3Q9H347 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 RNA5SP413-201ENST00000516373 109 ntBASIC18.53■□□□□ 0.56
UBQLN3Q9H347 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 AC092720.2-201ENST00000602388 1665 ntBASIC18.53■□□□□ 0.56
UBQLN3Q9H347 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
UBQLN3Q9H347 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 AL356652.1-201ENST00000615962 565 ntBASIC18.52■□□□□ 0.56
UBQLN3Q9H347 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBQLN3Q9H347 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBQLN3Q9H347 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 TSPY20P-201ENST00000450910 630 ntBASIC18.51■□□□□ 0.55
UBQLN3Q9H347 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBQLN3Q9H347 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms