Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VCX3BQ9H321 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3BQ9H321 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCX3BQ9H321 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCX3BQ9H321 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCX3BQ9H321 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VCX3BQ9H321 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VCX3BQ9H321 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.06■□□□□ 0.64
VCX3BQ9H321 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 OR2I1P-207ENST00000453522 948 ntBASIC19.05■□□□□ 0.64
VCX3BQ9H321 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VCX3BQ9H321 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
VCX3BQ9H321 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 DUX4L18-201ENST00000553347 1267 ntBASIC19.04■□□□□ 0.64
VCX3BQ9H321 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 U85056.1-201ENST00000616429 682 ntBASIC19.04■□□□□ 0.64
VCX3BQ9H321 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
VCX3BQ9H321 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VCX3BQ9H321 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VCX3BQ9H321 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 KRT18P60-201ENST00000312876 1297 ntBASIC19.03■□□□□ 0.64
VCX3BQ9H321 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.03■□□□□ 0.64
VCX3BQ9H321 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms