Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC006970.2-201ENST00000450065 779 ntBASIC18.41■□□□□ 0.54
TRIM2Q9C040 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM2Q9C040 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM2Q9C040 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM2Q9C040 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM2Q9C040 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM2Q9C040 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM2Q9C040 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM2Q9C040 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 AC007322.1-201ENST00000426983 750 ntBASIC18.4■□□□□ 0.54
TRIM2Q9C040 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM2Q9C040 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM2Q9C040 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM2Q9C040 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
TRIM2Q9C040 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 BX119927.1-201ENST00000636596 1552 ntBASIC18.39■□□□□ 0.53
TRIM2Q9C040 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.39■□□□□ 0.53
TRIM2Q9C040 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM2Q9C040 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM2Q9C040 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 KRT18P68-201ENST00000392293 1000 ntBASIC18.38■□□□□ 0.53
TRIM2Q9C040 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 CYP2T1P-201ENST00000432607 1285 ntBASIC18.38■□□□□ 0.53
TRIM2Q9C040 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TRIM2Q9C040 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM2Q9C040 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 MIR663A-201ENST00000385250 93 ntBASIC18.37■□□□□ 0.53
TRIM2Q9C040 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM2Q9C040 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM2Q9C040 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM2Q9C040 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM2Q9C040 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms