Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 AC012618.2-201ENST00000428058 849 ntBASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.37■■□□□ 1.49
RPAP1Q9BWH6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
RPAP1Q9BWH6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 KRT8P36-201ENST00000489121 1440 ntBASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 Z99916.2-201ENST00000604037 246 ntBASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
RPAP1Q9BWH6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
RPAP1Q9BWH6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 MTDHP1-201ENST00000605323 784 ntBASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.33■■□□□ 1.49
RPAP1Q9BWH6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
RPAP1Q9BWH6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.33■■□□□ 1.48
RPAP1Q9BWH6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 SNORA78-201ENST00000459373 127 ntBASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AC133681.1-201ENST00000465482 601 ntBASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AC073912.3-201ENST00000624414 853 ntBASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AL162377.1-201ENST00000618844 1793 ntBASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RPAP1Q9BWH6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RPAP1Q9BWH6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
RPAP1Q9BWH6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RPAP1Q9BWH6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RPAP1Q9BWH6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RPAP1Q9BWH6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms