Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
FYCO1Q9BQS8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.29■■■□□ 2.6
FYCO1Q9BQS8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
FYCO1Q9BQS8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
FYCO1Q9BQS8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
FYCO1Q9BQS8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 AC211429.1-201ENST00000415277 523 ntBASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 AC116351.2-201ENST00000606540 1585 ntBASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
FYCO1Q9BQS8 FAM197Y1-201ENST00000421178 764 ntBASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 AC073195.1-201ENST00000607241 877 ntBASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 AC097493.4-201ENST00000641197 219 ntBASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC31.27■■■□□ 2.6
FYCO1Q9BQS8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
FYCO1Q9BQS8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.26■■■□□ 2.59
FYCO1Q9BQS8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 REXO1L10P-201ENST00000615707 1290 ntBASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 REXO1L12P-201ENST00000622156 912 ntBASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FYCO1Q9BQS8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 YBX1P10-201ENST00000444752 975 ntBASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.24■■■□□ 2.59
FYCO1Q9BQS8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FYCO1Q9BQS8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.22■■■□□ 2.59
FYCO1Q9BQS8 RBM17P1-201ENST00000453646 1190 ntBASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FYCO1Q9BQS8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
FYCO1Q9BQS8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.2■■■□□ 2.59
FYCO1Q9BQS8 KRT16P1-201ENST00000399124 1418 ntBASIC31.2■■■□□ 2.59
FYCO1Q9BQS8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms