Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.33■□□□□ 0.84
SEMA3CQ99985 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
SEMA3CQ99985 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA3CQ99985 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA3CQ99985 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 HLA-B-256ENST00000639848 1089 ntBASIC20.32■□□□□ 0.84
SEMA3CQ99985 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SEMA3CQ99985 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3CQ99985 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 AC092368.3-202ENST00000574180 1591 ntBASIC20.31■□□□□ 0.84
SEMA3CQ99985 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 HLA-G-202ENST00000376815 851 ntBASIC20.31■□□□□ 0.84
SEMA3CQ99985 HLA-G-203ENST00000376818 1127 ntBASIC20.31■□□□□ 0.84
SEMA3CQ99985 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA3CQ99985 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SEMA3CQ99985 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.3■□□□□ 0.84
SEMA3CQ99985 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 AC060766.5-201ENST00000590539 871 ntBASIC20.3■□□□□ 0.84
SEMA3CQ99985 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SEMA3CQ99985 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 AC112907.3-201ENST00000577781 2400 ntBASIC20.29■□□□□ 0.84
SEMA3CQ99985 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 BX119927.1-201ENST00000636596 1552 ntBASIC20.29■□□□□ 0.84
SEMA3CQ99985 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SEMA3CQ99985 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SEMA3CQ99985 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA3CQ99985 PNMA6B-201ENST00000538162 1200 ntBASIC20.28■□□□□ 0.84
SEMA3CQ99985 AC005829.2-201ENST00000571422 1056 ntBASIC20.28■□□□□ 0.84
SEMA3CQ99985 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3CQ99985 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA3CQ99985 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms