Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 AC005229.4-201ENST00000610085 2198 ntBASIC20.78■□□□□ 0.92
NOTCH4Q99466 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 KSR1P1-201ENST00000446298 240 ntBASIC20.78■□□□□ 0.92
NOTCH4Q99466 KRT18P35-201ENST00000510488 1269 ntBASIC20.78■□□□□ 0.92
NOTCH4Q99466 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.78■□□□□ 0.92
NOTCH4Q99466 AC092865.7-201ENST00000641832 219 ntBASIC20.78■□□□□ 0.92
NOTCH4Q99466 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NOTCH4Q99466 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NOTCH4Q99466 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NOTCH4Q99466 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NOTCH4Q99466 C1QL1P1-201ENST00000568105 661 ntBASIC20.77■□□□□ 0.92
NOTCH4Q99466 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NOTCH4Q99466 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NOTCH4Q99466 AC113347.1-201ENST00000413321 391 ntBASIC20.77■□□□□ 0.91
NOTCH4Q99466 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.77■□□□□ 0.91
NOTCH4Q99466 KRT8P20-201ENST00000423953 1409 ntBASIC20.77■□□□□ 0.91
NOTCH4Q99466 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.77■□□□□ 0.91
NOTCH4Q99466 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.77■□□□□ 0.91
NOTCH4Q99466 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
NOTCH4Q99466 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 AP000525.1-201ENST00000608286 694 ntBASIC20.76■□□□□ 0.91
NOTCH4Q99466 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NOTCH4Q99466 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NOTCH4Q99466 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH4Q99466 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH4Q99466 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH4Q99466 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH4Q99466 AC005521.1-201ENST00000393351 872 ntBASIC20.75■□□□□ 0.91
NOTCH4Q99466 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NOTCH4Q99466 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.75■□□□□ 0.91
NOTCH4Q99466 AC010947.1-201ENST00000623454 693 ntBASIC20.75■□□□□ 0.91
NOTCH4Q99466 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NOTCH4Q99466 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.74■□□□□ 0.91
NOTCH4Q99466 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.74■□□□□ 0.91
NOTCH4Q99466 AP002982.1-201ENST00000492365 877 ntBASIC20.74■□□□□ 0.91
NOTCH4Q99466 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.74■□□□□ 0.91
NOTCH4Q99466 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NOTCH4Q99466 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NOTCH4Q99466 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.74■□□□□ 0.91
NOTCH4Q99466 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
NOTCH4Q99466 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NOTCH4Q99466 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms