Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3BQ96PB8 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
LRRC3BQ96PB8 AC005229.4-201ENST00000610085 2198 ntBASIC20.61■□□□□ 0.89
LRRC3BQ96PB8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRC3BQ96PB8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 RBM17P1-201ENST00000453646 1190 ntBASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 NUDT16P1-203ENST00000513809 620 ntBASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 AC004264.1-201ENST00000608354 794 ntBASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRRC3BQ96PB8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC3BQ96PB8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.58■□□□□ 0.89
LRRC3BQ96PB8 KRT8P17-201ENST00000453110 1448 ntBASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 FP700111.2-201ENST00000619190 1892 ntBASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LRRC3BQ96PB8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 AP002982.1-201ENST00000492365 877 ntBASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 AP000525.1-201ENST00000608286 694 ntBASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC3BQ96PB8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC3BQ96PB8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC3BQ96PB8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC3BQ96PB8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms