Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 ECEL1P3-201ENST00000427961 737 ntBASIC16.29■□□□□ 0.2
ZNF48Q96MX3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 AC110285.5-201ENST00000611501 352 ntBASIC16.29■□□□□ 0.2
ZNF48Q96MX3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF48Q96MX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ZNF48Q96MX3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 REXO1L12P-201ENST00000622156 912 ntBASIC16.27■□□□□ 0.2
ZNF48Q96MX3 AL049637.2-201ENST00000641778 930 ntBASIC16.27■□□□□ 0.2
ZNF48Q96MX3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF48Q96MX3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ZNF48Q96MX3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ZNF48Q96MX3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms