Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.57■□□□□ 0.88
IFT43Q96FT9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
IFT43Q96FT9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 RNA5SP413-201ENST00000516373 109 ntBASIC20.56■□□□□ 0.88
IFT43Q96FT9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 ITM2C-210ENST00000620962 501 ntBASIC20.56■□□□□ 0.88
IFT43Q96FT9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IFT43Q96FT9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
IFT43Q96FT9 AP005212.1-201ENST00000581547 1997 ntBASIC20.55■□□□□ 0.88
IFT43Q96FT9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 LINC01006-201ENST00000333319 2292 ntBASIC20.55■□□□□ 0.88
IFT43Q96FT9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 AC091874.3-201ENST00000512672 1195 ntBASIC20.55■□□□□ 0.88
IFT43Q96FT9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IFT43Q96FT9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
IFT43Q96FT9 AC020907.5-201ENST00000624372 1936 ntBASIC20.55■□□□□ 0.88
IFT43Q96FT9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.54■□□□□ 0.88
IFT43Q96FT9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 KRT18P68-201ENST00000392293 1000 ntBASIC20.54■□□□□ 0.88
IFT43Q96FT9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 CYP2T3P-201ENST00000601990 817 ntBASIC20.54■□□□□ 0.88
IFT43Q96FT9 AC083880.1-201ENST00000608266 535 ntBASIC20.54■□□□□ 0.88
IFT43Q96FT9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IFT43Q96FT9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IFT43Q96FT9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 AL355472.2-201ENST00000422958 438 ntBASIC20.53■□□□□ 0.88
IFT43Q96FT9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms