Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 TREX1-205ENST00000625293 1783 ntBASIC20.45■□□□□ 0.86
RTP4Q96DX8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 AL512625.2-201ENST00000417533 625 ntBASIC20.45■□□□□ 0.86
RTP4Q96DX8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.45■□□□□ 0.86
RTP4Q96DX8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.45■□□□□ 0.86
RTP4Q96DX8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.45■□□□□ 0.86
RTP4Q96DX8 AC008694.1-202ENST00000636953 945 ntBASIC20.45■□□□□ 0.86
RTP4Q96DX8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.45■□□□□ 0.86
RTP4Q96DX8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RTP4Q96DX8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
RTP4Q96DX8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTP4Q96DX8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTP4Q96DX8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RTP4Q96DX8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTP4Q96DX8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTP4Q96DX8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 AL355472.2-201ENST00000422958 438 ntBASIC20.44■□□□□ 0.86
RTP4Q96DX8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.44■□□□□ 0.86
RTP4Q96DX8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RTP4Q96DX8 KRT8P20-201ENST00000423953 1409 ntBASIC20.44■□□□□ 0.86
RTP4Q96DX8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 GPX1P1-201ENST00000388829 606 ntBASIC20.43■□□□□ 0.86
RTP4Q96DX8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTP4Q96DX8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.43■□□□□ 0.86
RTP4Q96DX8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 AL589743.5-201ENST00000616611 1050 ntBASIC20.42■□□□□ 0.86
RTP4Q96DX8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 KRT16P6-202ENST00000425692 1426 ntBASIC20.42■□□□□ 0.86
RTP4Q96DX8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RTP4Q96DX8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.42■□□□□ 0.86
RTP4Q96DX8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.41■□□□□ 0.86
RTP4Q96DX8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.41■□□□□ 0.86
RTP4Q96DX8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.41■□□□□ 0.86
RTP4Q96DX8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.41■□□□□ 0.86
RTP4Q96DX8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RTP4Q96DX8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.41■□□□□ 0.86
RTP4Q96DX8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTP4Q96DX8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTP4Q96DX8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTP4Q96DX8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms