Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 HLA-L-209ENST00000420110 1011 ntBASIC17.67■□□□□ 0.42
TMEM54Q969K7 AC069152.1-201ENST00000438030 544 ntBASIC17.67■□□□□ 0.42
TMEM54Q969K7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM54Q969K7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM54Q969K7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TMEM54Q969K7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM54Q969K7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 AL691432.2-201ENST00000607222 2038 ntBASIC17.67■□□□□ 0.42
TMEM54Q969K7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM54Q969K7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEM54Q969K7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM54Q969K7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 ID1-201ENST00000376105 1233 ntBASIC17.65■□□□□ 0.42
TMEM54Q969K7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 AC083880.1-201ENST00000608266 535 ntBASIC17.65■□□□□ 0.42
TMEM54Q969K7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM54Q969K7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM54Q969K7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM54Q969K7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM54Q969K7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.64■□□□□ 0.42
TMEM54Q969K7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 AC005829.2-201ENST00000571422 1056 ntBASIC17.64■□□□□ 0.41
TMEM54Q969K7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TMEM54Q969K7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM54Q969K7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms