Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 AC113347.1-201ENST00000413321 391 ntBASIC24.79■■□□□ 1.56
RPGRQ92834 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.79■■□□□ 1.56
RPGRQ92834 AC116562.2-201ENST00000507042 360 ntBASIC24.79■■□□□ 1.56
RPGRQ92834 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.79■■□□□ 1.56
RPGRQ92834 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.79■■□□□ 1.56
RPGRQ92834 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RPGRQ92834 AL049796.1-201ENST00000565336 1766 ntBASIC24.79■■□□□ 1.56
RPGRQ92834 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RPGRQ92834 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RPGRQ92834 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.78■■□□□ 1.56
RPGRQ92834 AL024507.2-201ENST00000606070 2574 ntBASIC24.78■■□□□ 1.56
RPGRQ92834 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.78■■□□□ 1.56
RPGRQ92834 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.78■■□□□ 1.56
RPGRQ92834 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.78■■□□□ 1.56
RPGRQ92834 KRT18P57-201ENST00000443599 1254 ntBASIC24.78■■□□□ 1.56
RPGRQ92834 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.78■■□□□ 1.56
RPGRQ92834 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.78■■□□□ 1.56
RPGRQ92834 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.78■■□□□ 1.56
RPGRQ92834 FITM1-202ENST00000559294 800 ntBASIC24.78■■□□□ 1.56
RPGRQ92834 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RPGRQ92834 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.78■■□□□ 1.56
RPGRQ92834 CYP2D8P-201ENST00000433633 1490 ntBASIC24.77■■□□□ 1.56
RPGRQ92834 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.77■■□□□ 1.56
RPGRQ92834 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.77■■□□□ 1.56
RPGRQ92834 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.77■■□□□ 1.56
RPGRQ92834 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.77■■□□□ 1.56
RPGRQ92834 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.77■■□□□ 1.56
RPGRQ92834 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RPGRQ92834 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPGRQ92834 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
RPGRQ92834 KRT18P22-201ENST00000402024 1347 ntBASIC24.77■■□□□ 1.56
RPGRQ92834 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPGRQ92834 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.77■■□□□ 1.56
RPGRQ92834 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPGRQ92834 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RPGRQ92834 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 FBXW4P1-201ENST00000426721 2239 ntBASIC24.76■■□□□ 1.55
RPGRQ92834 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.76■■□□□ 1.55
RPGRQ92834 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
RPGRQ92834 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RPGRQ92834 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
RPGRQ92834 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RPGRQ92834 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.75■■□□□ 1.55
RPGRQ92834 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.75■■□□□ 1.55
RPGRQ92834 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.75■■□□□ 1.55
RPGRQ92834 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.75■■□□□ 1.55
RPGRQ92834 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.75■■□□□ 1.55
RPGRQ92834 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.75■■□□□ 1.55
RPGRQ92834 AC010947.1-201ENST00000623454 693 ntBASIC24.75■■□□□ 1.55
RPGRQ92834 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RPGRQ92834 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
RPGRQ92834 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
RPGRQ92834 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RPGRQ92834 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.74■■□□□ 1.55
RPGRQ92834 AL137013.1-201ENST00000432946 1228 ntBASIC24.74■■□□□ 1.55
RPGRQ92834 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.74■■□□□ 1.55
RPGRQ92834 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RPGRQ92834 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.74■■□□□ 1.55
RPGRQ92834 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.74■■□□□ 1.55
RPGRQ92834 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.74■■□□□ 1.55
RPGRQ92834 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.74■■□□□ 1.55
RPGRQ92834 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RPGRQ92834 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.73■■□□□ 1.55
RPGRQ92834 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 TERF1P1-201ENST00000311003 1181 ntBASIC24.73■■□□□ 1.55
RPGRQ92834 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.73■■□□□ 1.55
RPGRQ92834 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.73■■□□□ 1.55
RPGRQ92834 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.73■■□□□ 1.55
RPGRQ92834 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
RPGRQ92834 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RPGRQ92834 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms