Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 ZNF444P1-201ENST00000559497 298 ntBASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.09
SYNE2Q8WXH0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 KRT18P67-201ENST00000432816 1264 ntBASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SLC25A6P5-201ENST00000435663 894 ntBASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AP001005.1-201ENST00000571755 1248 ntBASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AC148477.8-201ENST00000624298 468 ntBASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
SYNE2Q8WXH0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 GCSHP2-201ENST00000560971 527 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC079630.1-202ENST00000618127 1840 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PPP1R14BP5-201ENST00000440334 435 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TSSC2-201ENST00000450217 709 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms