Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 AL162430.1-201ENST00000480705 870 ntBASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 AC137761.2-201ENST00000561729 223 ntBASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 AC145350.3-201ENST00000569033 163 ntBASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 MYCNOS-205ENST00000641950 531 ntBASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTN4IP1Q8WWV3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 MIR935-201ENST00000401179 91 ntBASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTN4IP1Q8WWV3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 KRT18P11-201ENST00000435214 1283 ntBASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms