Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPS4Y2Q8TD47 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 AC123595.1-201ENST00000440769 1046 ntBASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 MIR5787-201ENST00000611784 55 ntBASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPS4Y2Q8TD47 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 YBX1P1-201ENST00000445822 960 ntBASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 MIR6821-201ENST00000617625 74 ntBASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPS4Y2Q8TD47 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 AC026271.2-201ENST00000428091 497 ntBASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPS4Y2Q8TD47 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPS4Y2Q8TD47 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms