Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 AC073195.1-201ENST00000607241 877 ntBASIC17.39■□□□□ 0.37
LINC01560Q8TB33 AC012306.2-201ENST00000609350 630 ntBASIC17.39■□□□□ 0.37
LINC01560Q8TB33 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC01560Q8TB33 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 RCN1P1-201ENST00000400413 996 ntBASIC17.38■□□□□ 0.37
LINC01560Q8TB33 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC01560Q8TB33 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 AP002982.1-201ENST00000492365 877 ntBASIC17.37■□□□□ 0.37
LINC01560Q8TB33 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 AL121603.2-201ENST00000557373 2117 ntBASIC17.37■□□□□ 0.37
LINC01560Q8TB33 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
LINC01560Q8TB33 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 KRT8P20-201ENST00000423953 1409 ntBASIC17.36■□□□□ 0.37
LINC01560Q8TB33 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 PTBP1P-201ENST00000554374 1601 ntBASIC17.36■□□□□ 0.37
LINC01560Q8TB33 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC01560Q8TB33 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01560Q8TB33 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms