Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 AC243732.1-201ENST00000612648 864 ntBASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DNAAF1Q8NEP3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 KRT18P14-201ENST00000534205 1250 ntBASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DNAAF1Q8NEP3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 AL691432.2-201ENST00000607222 2038 ntBASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
DNAAF1Q8NEP3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 AP000974.1-201ENST00000623909 2387 ntBASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 DPP3P2-201ENST00000416030 1696 ntBASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms