Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HIPK4Q8NE63 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HIPK4Q8NE63 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
HIPK4Q8NE63 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HIPK4Q8NE63 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HIPK4Q8NE63 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 RASA4CP-201ENST00000424092 1398 ntBASIC19.39■□□□□ 0.69
HIPK4Q8NE63 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIPK4Q8NE63 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 EEF1DP3-203ENST00000566025 782 ntBASIC19.38■□□□□ 0.69
HIPK4Q8NE63 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.38■□□□□ 0.69
HIPK4Q8NE63 AC053503.5-201ENST00000601508 636 ntBASIC19.38■□□□□ 0.69
HIPK4Q8NE63 AL355001.2-201ENST00000620617 1191 ntBASIC19.38■□□□□ 0.69
HIPK4Q8NE63 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.38■□□□□ 0.69
HIPK4Q8NE63 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK4Q8NE63 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 MIR939-201ENST00000401314 82 ntBASIC19.36■□□□□ 0.69
HIPK4Q8NE63 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 AC091305.1-201ENST00000479476 895 ntBASIC19.36■□□□□ 0.69
HIPK4Q8NE63 AF213884.3-201ENST00000563833 479 ntBASIC19.36■□□□□ 0.69
HIPK4Q8NE63 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 AC093484.2-201ENST00000580996 2166 ntBASIC19.36■□□□□ 0.69
HIPK4Q8NE63 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK4Q8NE63 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.35■□□□□ 0.69
HIPK4Q8NE63 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK4Q8NE63 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms