Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC168Q8NDH2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 COX11P1-201ENST00000489116 835 ntBASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 AC111152.3-201ENST00000569699 673 ntBASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 IER3-202ENST00000376377 1350 ntBASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC168Q8NDH2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC168Q8NDH2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 CR769767.2-201ENST00000622735 460 ntBASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC168Q8NDH2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 AL359075.1-203ENST00000462729 1002 ntBASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 AC007663.1-201ENST00000438948 1240 ntBASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 AC023632.3-201ENST00000521633 145 ntBASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 CKBP1-201ENST00000565489 1086 ntBASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC168Q8NDH2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms