Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNEP1R1Q8N9A8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNEP1R1Q8N9A8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNEP1R1Q8N9A8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNEP1R1Q8N9A8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 AC008550.1-201ENST00000511500 884 ntBASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 PRKY-204ENST00000533551 1019 ntBASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 AC007225.1-201ENST00000566331 1836 ntBASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.79■□□□□ 0.44
CNEP1R1Q8N9A8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNEP1R1Q8N9A8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 KRASP1-201ENST00000407852 552 ntBASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNEP1R1Q8N9A8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 AC007375.3-201ENST00000600936 2314 ntBASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 AC124283.5-201ENST00000624661 1809 ntBASIC17.77■□□□□ 0.43
CNEP1R1Q8N9A8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 MIR718-201ENST00000390190 70 ntBASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNEP1R1Q8N9A8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNEP1R1Q8N9A8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNEP1R1Q8N9A8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNEP1R1Q8N9A8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms