Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC33Q8N5R6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 AC092368.3-202ENST00000574180 1591 ntBASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 PNMA6B-201ENST00000538162 1200 ntBASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC33Q8N5R6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 AL359736.2-201ENST00000621992 437 ntBASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC33Q8N5R6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 SMG8-203ENST00000578922 2178 ntBASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC33Q8N5R6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.95■□□□□ 0.95
CCDC33Q8N5R6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC33Q8N5R6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms