Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 YBX1P10-201ENST00000444752 975 ntBASIC28.04■■■□□ 2.08
XRN1Q8IZH2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
XRN1Q8IZH2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 EGLN1P1-201ENST00000531623 762 ntBASIC28.03■■■□□ 2.08
XRN1Q8IZH2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
XRN1Q8IZH2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 INGX-201ENST00000359239 846 ntBASIC28.02■■■□□ 2.08
XRN1Q8IZH2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AC117947.1-201ENST00000427448 529 ntBASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AC004980.1-204ENST00000429707 299 ntBASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AL358472.4-201ENST00000633140 710 ntBASIC28.02■■■□□ 2.08
XRN1Q8IZH2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
XRN1Q8IZH2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.08
XRN1Q8IZH2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
XRN1Q8IZH2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 UPK3BP1-201ENST00000428678 509 ntBASIC28.01■■■□□ 2.07
XRN1Q8IZH2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 FAM8A6P-201ENST00000407496 1135 ntBASIC28.01■■■□□ 2.07
XRN1Q8IZH2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 AC011506.1-201ENST00000474329 610 ntBASIC28.01■■■□□ 2.07
XRN1Q8IZH2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
XRN1Q8IZH2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 KRT8P20-201ENST00000423953 1409 ntBASIC28■■■□□ 2.07
XRN1Q8IZH2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 AK4P3-201ENST00000418260 669 ntBASIC28■■■□□ 2.07
XRN1Q8IZH2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC28■■■□□ 2.07
XRN1Q8IZH2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC28■■■□□ 2.07
XRN1Q8IZH2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 GUSBP5-202ENST00000510805 1989 ntBASIC27.99■■■□□ 2.07
XRN1Q8IZH2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC27.99■■■□□ 2.07
XRN1Q8IZH2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 H19-201ENST00000411754 1788 ntTSL 5 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 LIN28AP1-201ENST00000429574 405 ntBASIC27.98■■■□□ 2.07
XRN1Q8IZH2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
XRN1Q8IZH2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC27.97■■■□□ 2.07
XRN1Q8IZH2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.97■■■□□ 2.07
XRN1Q8IZH2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms