Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN4BQ8IWT1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 KRT8P20-201ENST00000423953 1409 ntBASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.14■□□□□ 0.98
SCN4BQ8IWT1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 AC239809.2-201ENST00000415381 517 ntBASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 AL031963.3-201ENST00000606441 850 ntBASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SCN4BQ8IWT1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 AIRN-201ENST00000601203 4374 ntBASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.13■□□□□ 0.97
SCN4BQ8IWT1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 KRASP1-201ENST00000407852 552 ntBASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 KRT8P17-201ENST00000453110 1448 ntBASIC21.12■□□□□ 0.97
SCN4BQ8IWT1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 PRKY-204ENST00000533551 1019 ntBASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SCN4BQ8IWT1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 RPS2P4-201ENST00000476944 856 ntBASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.1■□□□□ 0.97
SCN4BQ8IWT1 AC124016.1-201ENST00000609552 612 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms