Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 AC110285.5-201ENST00000611501 352 ntBASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.32■■□□□ 1.16
CCDC60Q8IWA6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 PRKY-204ENST00000533551 1019 ntBASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CCDC60Q8IWA6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 AL121906.2-201ENST00000621597 723 ntBASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC60Q8IWA6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC60Q8IWA6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCDC60Q8IWA6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 AC073314.1-201ENST00000568729 2216 ntBASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC60Q8IWA6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.15
CCDC60Q8IWA6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC60Q8IWA6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC60Q8IWA6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC60Q8IWA6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC60Q8IWA6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms