Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 AP005212.1-201ENST00000581547 1997 ntBASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRTM4Q86VH4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 RPS2P52-201ENST00000469610 820 ntBASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
LRRTM4Q86VH4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
LRRTM4Q86VH4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
LRRTM4Q86VH4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRTM4Q86VH4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRRTM4Q86VH4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 AC233263.1-201ENST00000578059 224 ntBASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 KRT16P6-202ENST00000425692 1426 ntBASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRTM4Q86VH4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRTM4Q86VH4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRTM4Q86VH4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms