Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 AC008687.6-201ENST00000596318 630 ntBASIC13.18□□□□□ -0.3
SCXQ7RTU7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCXQ7RTU7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.18□□□□□ -0.3
SCXQ7RTU7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 AC091799.1-201ENST00000422823 811 ntBASIC13.17□□□□□ -0.3
SCXQ7RTU7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 FAM21FP-204ENST00000608637 956 ntBASIC13.17□□□□□ -0.3
SCXQ7RTU7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SCXQ7RTU7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 ESRRAP1-201ENST00000400596 1257 ntBASIC13.16□□□□□ -0.3
SCXQ7RTU7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SCXQ7RTU7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SCXQ7RTU7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRORSD1P-201ENST00000295112 541 ntBASIC13.15□□□□□ -0.3
SCXQ7RTU7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 AL355472.2-201ENST00000422958 438 ntBASIC13.15□□□□□ -0.3
SCXQ7RTU7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCXQ7RTU7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms