Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NHLRC1Q6VVB1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.97■□□□□ 0.47
NHLRC1Q6VVB1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 AL121832.2-201ENST00000610979 668 ntBASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 AL589743.5-201ENST00000616611 1050 ntBASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.96■□□□□ 0.47
NHLRC1Q6VVB1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 MKRN4P-201ENST00000444706 1521 ntBASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 C2orf69P4-201ENST00000565394 541 ntBASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NHLRC1Q6VVB1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 AL020996.1-203ENST00000536896 2307 ntBASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
NHLRC1Q6VVB1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms