Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ITM2C-210ENST00000620962 501 ntBASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RFWD3Q6PCD5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 UNC93B4-201ENST00000505679 747 ntBASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFWD3Q6PCD5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 AC006557.6-201ENST00000623071 864 ntBASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFWD3Q6PCD5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 PRORSD1P-201ENST00000295112 541 ntBASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RFWD3Q6PCD5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFWD3Q6PCD5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 AC128676.1-201ENST00000454392 318 ntBASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFWD3Q6PCD5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms