Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 HLA-G-203ENST00000376818 1127 ntBASIC10.79□□□□□ -0.68
RNF213Q63HN8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 AC239800.4-201ENST00000603712 296 ntBASIC10.79□□□□□ -0.68
RNF213Q63HN8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RNF213Q63HN8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
RNF213Q63HN8 AL662844.1-201ENST00000546340 181 ntBASIC10.79□□□□□ -0.68
RNF213Q63HN8 AP001160.2-201ENST00000596071 487 ntBASIC10.79□□□□□ -0.68
RNF213Q63HN8 NFE2L3P1-201ENST00000588207 1959 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AL590627.1-203ENST00000421194 1026 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 FAM8A3P-201ENST00000427218 844 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 KRT18P31-201ENST00000506277 1292 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AC004812.2-201ENST00000611079 2094 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 AL121749.1-202ENST00000609313 2153 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 SPDYE15P-201ENST00000424157 909 ntBASIC10.78□□□□□ -0.68
RNF213Q63HN8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.78□□□□□ -0.68
RNF213Q63HN8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RNF213Q63HN8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.77□□□□□ -0.68
RNF213Q63HN8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RNF213Q63HN8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RNF213Q63HN8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RNF213Q63HN8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
RNF213Q63HN8 AL441883.1-201ENST00000566170 1045 ntBASIC10.77□□□□□ -0.68
RNF213Q63HN8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.77□□□□□ -0.68
RNF213Q63HN8 AC137767.1-201ENST00000602918 1920 ntBASIC10.77□□□□□ -0.68
RNF213Q63HN8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC10.77□□□□□ -0.69
RNF213Q63HN8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RNF213Q63HN8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 BX119927.1-201ENST00000636596 1552 ntBASIC10.76□□□□□ -0.69
RNF213Q63HN8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms