Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 AL031985.4-201ENST00000642138 673 ntBASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LYSMD4Q5XG99 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 DUX4L26-201ENST00000489078 1255 ntBASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 NTF6B-201ENST00000591913 560 ntBASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 PTBP1P-201ENST00000554374 1601 ntBASIC19.73■□□□□ 0.75
LYSMD4Q5XG99 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 LIN28AP1-201ENST00000429574 405 ntBASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 AC087388.1-201ENST00000571370 1112 ntBASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 AC244015.2-201ENST00000616358 1861 ntBASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LYSMD4Q5XG99 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 ECEL1P1-201ENST00000373592 1742 ntBASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 C2orf69P3-201ENST00000565542 1120 ntBASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LYSMD4Q5XG99 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 ATP5G1P1-201ENST00000448724 379 ntBASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 AC026271.3-201ENST00000571884 352 ntBASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 FSCN1P1-201ENST00000568912 1481 ntBASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 AC121338.2-201ENST00000622535 1744 ntBASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD4Q5XG99 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 AC104076.2-201ENST00000448912 469 ntBASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms