Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNFT1Q5M7Z0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
RNFT1Q5M7Z0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNFT1Q5M7Z0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 KRT16P5-201ENST00000455284 522 ntBASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AF186192.3-201ENST00000583427 947 ntBASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AL031963.3-201ENST00000606441 850 ntBASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AL121906.2-201ENST00000621597 723 ntBASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNFT1Q5M7Z0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 KRT8P20-201ENST00000423953 1409 ntBASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 HTR7P1-201ENST00000538670 1336 ntBASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 MIR4785-201ENST00000585005 73 ntBASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 AC007225.1-201ENST00000566331 1836 ntBASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNFT1Q5M7Z0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 AL355075.4-201ENST00000554988 638 ntBASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNFT1Q5M7Z0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNFT1Q5M7Z0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms