Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ODF4Q2M2E3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 KRT8P36-201ENST00000489121 1440 ntBASIC17.67■□□□□ 0.42
ODF4Q2M2E3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 KRT18P20-201ENST00000548986 1279 ntBASIC17.67■□□□□ 0.42
ODF4Q2M2E3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ODF4Q2M2E3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ODF4Q2M2E3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms