Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC1Q15915 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC1Q15915 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC1Q15915 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.23■□□□□ 0.67
ZIC1Q15915 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ZIC1Q15915 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.22■□□□□ 0.67
ZIC1Q15915 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.22■□□□□ 0.67
ZIC1Q15915 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ZIC1Q15915 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZIC1Q15915 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZIC1Q15915 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
ZIC1Q15915 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC1Q15915 AC124283.5-201ENST00000624661 1809 ntBASIC19.21■□□□□ 0.67
ZIC1Q15915 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC1Q15915 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZIC1Q15915 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC1Q15915 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.21■□□□□ 0.67
ZIC1Q15915 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
ZIC1Q15915 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZIC1Q15915 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ZIC1Q15915 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.2■□□□□ 0.66
ZIC1Q15915 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.2■□□□□ 0.66
ZIC1Q15915 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZIC1Q15915 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.2■□□□□ 0.66
ZIC1Q15915 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ZIC1Q15915 RN7SL471P-201ENST00000580476 299 ntBASIC19.2■□□□□ 0.66
ZIC1Q15915 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.2■□□□□ 0.66
ZIC1Q15915 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZIC1Q15915 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZIC1Q15915 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZIC1Q15915 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.19■□□□□ 0.66
ZIC1Q15915 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZIC1Q15915 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.19■□□□□ 0.66
ZIC1Q15915 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 AL158047.1-201ENST00000445918 881 ntBASIC19.19■□□□□ 0.66
ZIC1Q15915 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.19■□□□□ 0.66
ZIC1Q15915 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.19■□□□□ 0.66
ZIC1Q15915 AC142381.4-202ENST00000563973 229 ntBASIC19.19■□□□□ 0.66
ZIC1Q15915 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.19■□□□□ 0.66
ZIC1Q15915 AL031963.3-201ENST00000606441 850 ntBASIC19.19■□□□□ 0.66
ZIC1Q15915 AC066615.1-201ENST00000640911 628 ntBASIC19.19■□□□□ 0.66
ZIC1Q15915 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZIC1Q15915 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZIC1Q15915 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZIC1Q15915 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZIC1Q15915 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.18■□□□□ 0.66
ZIC1Q15915 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms