Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 ECM12YHR021W-A 456 nt1.13□□□□□ -2.23
VPS38Q05919 OLI1Q0130 231 nt1.12□□□□□ -2.23
VPS38Q05919 YLR120W-AYLR120W-A 102 nt1.12□□□□□ -2.23
VPS38Q05919 IML1YJR138W 4755 nt1.11□□□□□ -2.23
VPS38Q05919 tV(UAC)BtV(UAC)B 74 nt1.11□□□□□ -2.23
VPS38Q05919 tV(UAC)DtV(UAC)D 74 nt1.11□□□□□ -2.23
VPS38Q05919 MCM10YIL150C 1716 nt1.11□□□□□ -2.23
VPS38Q05919 APL1YJR005W 2103 nt1.1□□□□□ -2.23
VPS38Q05919 KAP120YPL125W 3099 nt1.1□□□□□ -2.23
VPS38Q05919 GEA2YEL022W 4380 nt1.1□□□□□ -2.23
VPS38Q05919 YEL020C-BYEL020C-B 198 nt1.09□□□□□ -2.23
VPS38Q05919 YJL197C-AYJL197C-A 282 nt1.09□□□□□ -2.23
VPS38Q05919 YOR015WYOR015W 360 nt1.09□□□□□ -2.23
VPS38Q05919 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
VPS38Q05919 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
VPS38Q05919 YGL052WYGL052W 306 nt1.08□□□□□ -2.24
VPS38Q05919 YMR172C-AYMR172C-A 384 nt1.08□□□□□ -2.24
VPS38Q05919 SGF11YPL047W 300 nt1.08□□□□□ -2.24
VPS38Q05919 YPL152W-AYPL152W-A 99 nt1.07□□□□□ -2.24
VPS38Q05919 ISD11YER048W-A 285 nt1.06□□□□□ -2.24
VPS38Q05919 CMC4YMR194C-B 222 nt1.06□□□□□ -2.24
VPS38Q05919 YPL044CYPL044C 549 nt1.06□□□□□ -2.24
VPS38Q05919 NOP9YJL010C 2001 nt1.06□□□□□ -2.24
VPS38Q05919 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
VPS38Q05919 YGR130CYGR130C 2451 nt1.05□□□□□ -2.24
VPS38Q05919 PAA1YDR071C 576 nt1.05□□□□□ -2.24
VPS38Q05919 YPR092WYPR092W 306 nt1.05□□□□□ -2.24
VPS38Q05919 YDL196WYDL196W 330 nt1.04□□□□□ -2.24
VPS38Q05919 YNL211CYNL211C 261 nt1.04□□□□□ -2.24
VPS38Q05919 DOP1YDR141C 5097 nt1.04□□□□□ -2.24
VPS38Q05919 snR49snR49 165 nt1.03□□□□□ -2.24
VPS38Q05919 TTI1YKL033W 3117 nt1.03□□□□□ -2.24
VPS38Q05919 YCR022CYCR022C 345 nt1.02□□□□□ -2.25
VPS38Q05919 YOR072W-BYOR072W-B 162 nt1.02□□□□□ -2.25
VPS38Q05919 YOR282WYOR282W 321 nt1.02□□□□□ -2.25
VPS38Q05919 YDR354C-AYDR354C-A 144 nt1.01□□□□□ -2.25
VPS38Q05919 YHR063W-AYHR063W-A 336 nt1.01□□□□□ -2.25
VPS38Q05919 BUD3YCL014W 4911 nt1□□□□□ -2.25
VPS38Q05919 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
VPS38Q05919 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
VPS38Q05919 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
VPS38Q05919 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
VPS38Q05919 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
VPS38Q05919 YJL026C-AYJL026C-A 222 nt1□□□□□ -2.25
VPS38Q05919 YLL019W-AYLL019W-A 93 nt0.99□□□□□ -2.25
VPS38Q05919 YAL067W-AYAL067W-A 228 nt0.99□□□□□ -2.25
VPS38Q05919 YMR307C-AYMR307C-A 195 nt0.99□□□□□ -2.25
VPS38Q05919 snR55snR55 98 nt0.98□□□□□ -2.25
VPS38Q05919 PMP1YCR024C-A 123 nt0.98□□□□□ -2.25
VPS38Q05919 RPL26BYGR034W 384 nt0.98□□□□□ -2.25
VPS38Q05919 PAU24YBR301W 363 nt0.98□□□□□ -2.25
VPS38Q05919 ASE1YOR058C 2658 nt0.98□□□□□ -2.25
VPS38Q05919 snR74snR74 88 nt0.97□□□□□ -2.25
VPS38Q05919 YFR012W-AYFR012W-A 87 nt0.96□□□□□ -2.26
VPS38Q05919 YGL188C-AYGL188C-A 141 nt0.96□□□□□ -2.26
VPS38Q05919 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
VPS38Q05919 YOL155W-AYOL155W-A 135 nt0.95□□□□□ -2.26
VPS38Q05919 BFR2YDR299W 1605 nt0.95□□□□□ -2.26
VPS38Q05919 PRP16YKR086W 3216 nt0.94□□□□□ -2.26
VPS38Q05919 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
VPS38Q05919 tF(GAA)QtF(GAA)Q 75 nt0.93□□□□□ -2.26
VPS38Q05919 YCR018C-AYCR018C-A 255 nt0.92□□□□□ -2.26
VPS38Q05919 YDL185C-AYDL185C-A 228 nt0.92□□□□□ -2.26
VPS38Q05919 snR8snR8 190 nt0.91□□□□□ -2.26
VPS38Q05919 YIR030W-AYIR030W-A 384 nt0.91□□□□□ -2.26
VPS38Q05919 YBR182C-AYBR182C-A 195 nt0.91□□□□□ -2.26
VPS38Q05919 YKU70YMR284W 1809 nt0.89□□□□□ -2.27
VPS38Q05919 SEC8YPR055W 3198 nt0.89□□□□□ -2.27
VPS38Q05919 YGL041CYGL041C 204 nt0.89□□□□□ -2.27
VPS38Q05919 ABF2YMR072W 552 nt0.89□□□□□ -2.27
VPS38Q05919 snR190snR190 190 nt0.87□□□□□ -2.27
VPS38Q05919 COY1YKL179C 2040 nt0.87□□□□□ -2.27
VPS38Q05919 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
VPS38Q05919 YPR160W-AYPR160W-A 81 nt0.86□□□□□ -2.27
VPS38Q05919 YGL123C-AYGL123C-A 231 nt0.85□□□□□ -2.27
VPS38Q05919 YLR282CYLR282C 342 nt0.85□□□□□ -2.27
VPS38Q05919 YLR399W-AYLR399W-A 105 nt0.85□□□□□ -2.27
VPS38Q05919 NPR2YEL062W 1848 nt0.85□□□□□ -2.27
VPS38Q05919 BLI1YKL061W 342 nt0.84□□□□□ -2.27
VPS38Q05919 YKL100W-AYKL100W-A 90 nt0.84□□□□□ -2.27
VPS38Q05919 RPS30BYOR182C 192 nt0.84□□□□□ -2.27
VPS38Q05919 snR80snR80 171 nt0.83□□□□□ -2.28
VPS38Q05919 COX5BYIL111W 456 nt0.82□□□□□ -2.28
VPS38Q05919 CHS6YJL099W 2241 nt0.82□□□□□ -2.28
VPS38Q05919 HAL9YOL089C 3093 nt0.82□□□□□ -2.28
VPS38Q05919 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
VPS38Q05919 YDR366CYDR366C 399 nt0.81□□□□□ -2.28
VPS38Q05919 COX12YLR038C 252 nt0.81□□□□□ -2.28
VPS38Q05919 YOR161W-AYOR161W-A 81 nt0.81□□□□□ -2.28
VPS38Q05919 YML002WYML002W 2214 nt0.81□□□□□ -2.28
VPS38Q05919 ULI1YFR026C 510 nt0.8□□□□□ -2.28
VPS38Q05919 YOR345CYOR345C 351 nt0.8□□□□□ -2.28
VPS38Q05919 FYV10YIL097W 1551 nt0.79□□□□□ -2.28
VPS38Q05919 PRP5YBR237W 2550 nt0.79□□□□□ -2.28
VPS38Q05919 YIL134C-AYIL134C-A 204 nt0.78□□□□□ -2.28
VPS38Q05919 YOR302WYOR302W 78 nt0.78□□□□□ -2.28
VPS38Q05919 YCR038W-AYCR038W-A 126 nt0.76□□□□□ -2.29
VPS38Q05919 YIL002W-AYIL002W-A 210 nt0.76□□□□□ -2.29
VPS38Q05919 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
VPS38Q05919 YER053C-AYER053C-A 114 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 56.4 ms