Protein–RNA interactions for Protein: Q04217

ECM16, Probable ATP-dependent RNA helicase DHR1, yeastyeast

Known RBP Predictions only

Length 1,267 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM16Q04217 IML1YJR138W 4755 nt1.69□□□□□ -2.14
ECM16Q04217 YNL284C-BYNL284C-B 5268 nt1.69□□□□□ -2.14
ECM16Q04217 UBP3YER151C 2739 nt1.68□□□□□ -2.14
ECM16Q04217 AZF1YOR113W 2745 nt1.68□□□□□ -2.14
ECM16Q04217 SWI4YER111C 3282 nt1.68□□□□□ -2.14
ECM16Q04217 ULI1YFR026C 510 nt1.68□□□□□ -2.14
ECM16Q04217 tQ(UUG)E2tQ(UUG)E2 72 nt1.68□□□□□ -2.14
ECM16Q04217 YMR175W-AYMR175W-A 195 nt1.68□□□□□ -2.14
ECM16Q04217 PRP39YML046W 1890 nt1.68□□□□□ -2.14
ECM16Q04217 SMC4YLR086W 4257 nt1.68□□□□□ -2.14
ECM16Q04217 YBR131C-AYBR131C-A 90 nt1.67□□□□□ -2.14
ECM16Q04217 RAD34YDR314C 2079 nt1.67□□□□□ -2.14
ECM16Q04217 CDC25YLR310C 4770 nt1.66□□□□□ -2.14
ECM16Q04217 RPS25BYLR333C 327 nt1.66□□□□□ -2.14
ECM16Q04217 YOR072W-BYOR072W-B 162 nt1.66□□□□□ -2.14
ECM16Q04217 SPO21YOL091W 1830 nt1.66□□□□□ -2.14
ECM16Q04217 HKR1YDR420W 5409 nt1.65□□□□□ -2.14
ECM16Q04217 SPO75YLL005C 2607 nt1.65□□□□□ -2.15
ECM16Q04217 SLX4YLR135W 2247 nt1.65□□□□□ -2.15
ECM16Q04217 ECM12YHR021W-A 456 nt1.65□□□□□ -2.15
ECM16Q04217 snR52snR52 92 nt1.65□□□□□ -2.15
ECM16Q04217 YLL007CYLL007C 1998 nt1.64□□□□□ -2.15
ECM16Q04217 ATP8Q0080 147 nt1.63□□□□□ -2.15
ECM16Q04217 YJL120WYJL120W 324 nt1.63□□□□□ -2.15
ECM16Q04217 SEC21YNL287W 2808 nt1.63□□□□□ -2.15
ECM16Q04217 CUL3YGR003W 2235 nt1.63□□□□□ -2.15
ECM16Q04217 YDL007C-AYDL007C-A 258 nt1.62□□□□□ -2.15
ECM16Q04217 YIR044CYIR044C 186 nt1.62□□□□□ -2.15
ECM16Q04217 YNL097C-BYNL097C-B 123 nt1.62□□□□□ -2.15
ECM16Q04217 AIM44YPL158C 2277 nt1.61□□□□□ -2.15
ECM16Q04217 RSM22YKL155C 1887 nt1.61□□□□□ -2.15
ECM16Q04217 YOR170WYOR170W 306 nt1.61□□□□□ -2.15
ECM16Q04217 PTP2YOR208W 2253 nt1.6□□□□□ -2.15
ECM16Q04217 MYO1YHR023W 5787 nt1.6□□□□□ -2.15
ECM16Q04217 UTP20YBL004W 7482 nt1.59□□□□□ -2.15
ECM16Q04217 snR46snR46 197 nt1.59□□□□□ -2.15
ECM16Q04217 YLL019W-AYLL019W-A 93 nt1.58□□□□□ -2.16
ECM16Q04217 YOR345CYOR345C 351 nt1.58□□□□□ -2.16
ECM16Q04217 SLI15YBR156C 2097 nt1.58□□□□□ -2.16
ECM16Q04217 TTI1YKL033W 3117 nt1.58□□□□□ -2.16
ECM16Q04217 DOP1YDR141C 5097 nt1.57□□□□□ -2.16
ECM16Q04217 TRM732YMR259C 4263 nt1.57□□□□□ -2.16
ECM16Q04217 NST1YNL091W 3723 nt1.57□□□□□ -2.16
ECM16Q04217 PAN2YGL094C 3348 nt1.56□□□□□ -2.16
ECM16Q04217 PBY1YBR094W 2262 nt1.56□□□□□ -2.16
ECM16Q04217 AHC1YOR023C 1701 nt1.55□□□□□ -2.16
ECM16Q04217 YLL020CYLL020C 306 nt1.55□□□□□ -2.16
ECM16Q04217 snR14snR14 160 nt1.55□□□□□ -2.16
ECM16Q04217 MMS4YBR098W 2076 nt1.55□□□□□ -2.16
ECM16Q04217 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
ECM16Q04217 YDL196WYDL196W 330 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
ECM16Q04217 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
ECM16Q04217 YNL170WYNL170W 396 nt1.54□□□□□ -2.16
ECM16Q04217 RPL33BYOR234C 324 nt1.54□□□□□ -2.16
ECM16Q04217 SLD3YGL113W 2007 nt1.54□□□□□ -2.16
ECM16Q04217 YEL073CYEL073C 324 nt1.53□□□□□ -2.16
ECM16Q04217 QCR9YGR183C 201 nt1.53□□□□□ -2.16
ECM16Q04217 APL3YBL037W 3078 nt1.53□□□□□ -2.16
ECM16Q04217 RPS30BYOR182C 192 nt1.53□□□□□ -2.16
ECM16Q04217 YOR381W-AYOR381W-A 168 nt1.53□□□□□ -2.16
ECM16Q04217 IFH1YLR223C 3258 nt1.51□□□□□ -2.17
ECM16Q04217 NUP188YML103C 4968 nt1.51□□□□□ -2.17
ECM16Q04217 YDR521WYDR521W 336 nt1.5□□□□□ -2.17
ECM16Q04217 MDS3YGL197W 4464 nt1.5□□□□□ -2.17
ECM16Q04217 PMP1YCR024C-A 123 nt1.49□□□□□ -2.17
ECM16Q04217 YIL020C-AYIL020C-A 339 nt1.49□□□□□ -2.17
ECM16Q04217 COY1YKL179C 2040 nt1.48□□□□□ -2.17
ECM16Q04217 YBR206WYBR206W 324 nt1.47□□□□□ -2.17
ECM16Q04217 EAF1YDR359C 2949 nt1.47□□□□□ -2.17
ECM16Q04217 RAD9YDR217C 3930 nt1.47□□□□□ -2.17
ECM16Q04217 SDH6YDR379C-A 240 nt1.46□□□□□ -2.18
ECM16Q04217 NUP157YER105C 4176 nt1.46□□□□□ -2.18
ECM16Q04217 SET3YKR029C 2256 nt1.45□□□□□ -2.18
ECM16Q04217 YDR354C-AYDR354C-A 144 nt1.45□□□□□ -2.18
ECM16Q04217 YGR164WYGR164W 336 nt1.45□□□□□ -2.18
ECM16Q04217 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
ECM16Q04217 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
ECM16Q04217 YBR200W-AYBR200W-A 165 nt1.45□□□□□ -2.18
ECM16Q04217 STB6YKL072W 2301 nt1.45□□□□□ -2.18
ECM16Q04217 SPT7YBR081C 3999 nt1.44□□□□□ -2.18
ECM16Q04217 YBR221W-AYBR221W-A 105 nt1.43□□□□□ -2.18
ECM16Q04217 YDL206WYDL206W 2289 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)BtF(GAA)B 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)FtF(GAA)F 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)GtF(GAA)G 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)H1tF(GAA)H1 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)H2tF(GAA)H2 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)MtF(GAA)M 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)P1tF(GAA)P1 73 nt1.42□□□□□ -2.18
ECM16Q04217 tF(GAA)P2tF(GAA)P2 73 nt1.42□□□□□ -2.18
ECM16Q04217 YDL073WYDL073W 2955 nt1.42□□□□□ -2.18
ECM16Q04217 STO1YMR125W 2586 nt1.42□□□□□ -2.18
ECM16Q04217 SMC1YFL008W 3678 nt1.4□□□□□ -2.19
ECM16Q04217 APL1YJR005W 2103 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms