Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YLR422WYLR422W 5799 nt1.69□□□□□ -2.14
NHX1Q04121 YOR093CYOR093C 4947 nt1.69□□□□□ -2.14
NHX1Q04121 YMR247W-AYMR247W-A 144 nt1.69□□□□□ -2.14
NHX1Q04121 YOR161W-BYOR161W-B 261 nt1.69□□□□□ -2.14
NHX1Q04121 POL5YEL055C 3069 nt1.69□□□□□ -2.14
NHX1Q04121 MYO2YOR326W 4725 nt1.69□□□□□ -2.14
NHX1Q04121 PMP1YCR024C-A 123 nt1.68□□□□□ -2.14
NHX1Q04121 PAA1YDR071C 576 nt1.68□□□□□ -2.14
NHX1Q04121 YEL073CYEL073C 324 nt1.68□□□□□ -2.14
NHX1Q04121 SAC3YDR159W 3906 nt1.67□□□□□ -2.14
NHX1Q04121 BST1YFL025C 3090 nt1.67□□□□□ -2.14
NHX1Q04121 YIL134C-AYIL134C-A 204 nt1.67□□□□□ -2.14
NHX1Q04121 RPS30BYOR182C 192 nt1.67□□□□□ -2.14
NHX1Q04121 YAL067W-AYAL067W-A 228 nt1.66□□□□□ -2.14
NHX1Q04121 COA6YMR244C-A 315 nt1.66□□□□□ -2.14
NHX1Q04121 YOR381W-AYOR381W-A 168 nt1.66□□□□□ -2.14
NHX1Q04121 YOR019WYOR019W 2193 nt1.66□□□□□ -2.14
NHX1Q04121 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
NHX1Q04121 COX12YLR038C 252 nt1.65□□□□□ -2.15
NHX1Q04121 TTI1YKL033W 3117 nt1.65□□□□□ -2.15
NHX1Q04121 SET3YKR029C 2256 nt1.65□□□□□ -2.15
NHX1Q04121 SWI4YER111C 3282 nt1.64□□□□□ -2.15
NHX1Q04121 STO1YMR125W 2586 nt1.63□□□□□ -2.15
NHX1Q04121 YNL211CYNL211C 261 nt1.63□□□□□ -2.15
NHX1Q04121 TRM732YMR259C 4263 nt1.62□□□□□ -2.15
NHX1Q04121 YBR221W-AYBR221W-A 105 nt1.61□□□□□ -2.15
NHX1Q04121 RSM22YKL155C 1887 nt1.6□□□□□ -2.15
NHX1Q04121 APL3YBL037W 3078 nt1.6□□□□□ -2.15
NHX1Q04121 SMC1YFL008W 3678 nt1.6□□□□□ -2.15
NHX1Q04121 PMD1YER132C 5262 nt1.6□□□□□ -2.15
NHX1Q04121 YDL007C-AYDL007C-A 258 nt1.6□□□□□ -2.15
NHX1Q04121 YPL044CYPL044C 549 nt1.59□□□□□ -2.15
NHX1Q04121 DNF3YMR162C 4971 nt1.58□□□□□ -2.16
NHX1Q04121 YCR038W-AYCR038W-A 126 nt1.58□□□□□ -2.16
NHX1Q04121 Q0092Q0092 141 nt1.58□□□□□ -2.16
NHX1Q04121 EST2YLR318W 2655 nt1.58□□□□□ -2.16
NHX1Q04121 WAR1YML076C 2835 nt1.58□□□□□ -2.16
NHX1Q04121 AZF1YOR113W 2745 nt1.57□□□□□ -2.16
NHX1Q04121 NUP145YGL092W 3954 nt1.57□□□□□ -2.16
NHX1Q04121 YIL002W-AYIL002W-A 210 nt1.57□□□□□ -2.16
NHX1Q04121 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
NHX1Q04121 MEC1YBR136W 7107 nt1.56□□□□□ -2.16
NHX1Q04121 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
NHX1Q04121 EAF1YDR359C 2949 nt1.56□□□□□ -2.16
NHX1Q04121 NUP188YML103C 4968 nt1.55□□□□□ -2.16
NHX1Q04121 CMC4YMR194C-B 222 nt1.55□□□□□ -2.16
NHX1Q04121 YBR200W-AYBR200W-A 165 nt1.55□□□□□ -2.16
NHX1Q04121 SXM1YDR395W 2835 nt1.55□□□□□ -2.16
NHX1Q04121 NOP9YJL010C 2001 nt1.54□□□□□ -2.16
NHX1Q04121 YGL123C-AYGL123C-A 231 nt1.54□□□□□ -2.16
NHX1Q04121 CAT8YMR280C 4302 nt1.53□□□□□ -2.16
NHX1Q04121 BRR2YER172C 6492 nt1.53□□□□□ -2.16
NHX1Q04121 ROM2YLR371W 4071 nt1.53□□□□□ -2.17
NHX1Q04121 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
NHX1Q04121 MSN5YDR335W 3675 nt1.52□□□□□ -2.17
NHX1Q04121 CLU1YMR012W 3834 nt1.51□□□□□ -2.17
NHX1Q04121 YKL100W-AYKL100W-A 90 nt1.51□□□□□ -2.17
NHX1Q04121 YLL020CYLL020C 306 nt1.51□□□□□ -2.17
NHX1Q04121 SEC3YER008C 4011 nt1.5□□□□□ -2.17
NHX1Q04121 ATP8Q0080 147 nt1.5□□□□□ -2.17
NHX1Q04121 YER053C-AYER053C-A 114 nt1.5□□□□□ -2.17
NHX1Q04121 COX5BYIL111W 456 nt1.5□□□□□ -2.17
NHX1Q04121 NUP192YJL039C 5052 nt1.49□□□□□ -2.17
NHX1Q04121 YOR170WYOR170W 306 nt1.49□□□□□ -2.17
NHX1Q04121 YLR282CYLR282C 342 nt1.48□□□□□ -2.17
NHX1Q04121 YOR161W-AYOR161W-A 81 nt1.48□□□□□ -2.17
NHX1Q04121 IRA1YBR140C 9279 nt1.48□□□□□ -2.17
NHX1Q04121 PRP5YBR237W 2550 nt1.48□□□□□ -2.17
NHX1Q04121 PRP42YDR235W 1635 nt1.48□□□□□ -2.17
NHX1Q04121 CDC39YCR093W 6327 nt1.47□□□□□ -2.17
NHX1Q04121 CHS1YNL192W 3396 nt1.47□□□□□ -2.17
NHX1Q04121 GEA2YEL022W 4380 nt1.47□□□□□ -2.17
NHX1Q04121 NUP157YER105C 4176 nt1.47□□□□□ -2.17
NHX1Q04121 PIK1YNL267W 3201 nt1.46□□□□□ -2.18
NHX1Q04121 RPL26BYGR034W 384 nt1.46□□□□□ -2.18
NHX1Q04121 CDC31YOR257W 486 nt1.46□□□□□ -2.18
NHX1Q04121 BFR2YDR299W 1605 nt1.46□□□□□ -2.18
NHX1Q04121 YFR012W-AYFR012W-A 87 nt1.45□□□□□ -2.18
NHX1Q04121 HKR1YDR420W 5409 nt1.45□□□□□ -2.18
NHX1Q04121 STB6YKL072W 2301 nt1.45□□□□□ -2.18
NHX1Q04121 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
NHX1Q04121 ASE1YOR058C 2658 nt1.44□□□□□ -2.18
NHX1Q04121 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
NHX1Q04121 YBL053WYBL053W 375 nt1.43□□□□□ -2.18
NHX1Q04121 UTP8YGR128C 2142 nt1.43□□□□□ -2.18
NHX1Q04121 YML002WYML002W 2214 nt1.43□□□□□ -2.18
NHX1Q04121 SNU13YEL026W 381 nt1.42□□□□□ -2.18
NHX1Q04121 YGR164WYGR164W 336 nt1.42□□□□□ -2.18
NHX1Q04121 YNL170WYNL170W 396 nt1.42□□□□□ -2.18
NHX1Q04121 YHL015W-AYHL015W-A 84 nt1.41□□□□□ -2.18
NHX1Q04121 snR190snR190 190 nt1.41□□□□□ -2.18
NHX1Q04121 YLR041WYLR041W 321 nt1.4□□□□□ -2.19
NHX1Q04121 YOR102WYOR102W 351 nt1.4□□□□□ -2.19
NHX1Q04121 PET127YOR017W 2403 nt1.4□□□□□ -2.19
NHX1Q04121 SDH6YDR379C-A 240 nt1.39□□□□□ -2.19
NHX1Q04121 KAP120YPL125W 3099 nt1.38□□□□□ -2.19
NHX1Q04121 snR48snR48 113 nt1.38□□□□□ -2.19
NHX1Q04121 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
NHX1Q04121 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
NHX1Q04121 YGL182CYGL182C 324 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms