Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCS1Q01581 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCS1Q01581 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCS1Q01581 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCS1Q01581 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 MCRIP2P1-201ENST00000394346 511 ntBASIC19.28■□□□□ 0.68
HMGCS1Q01581 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 IKBKGP1-201ENST00000612193 1073 ntBASIC19.28■□□□□ 0.68
HMGCS1Q01581 BID-214ENST00000617586 542 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGCS1Q01581 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.28■□□□□ 0.68
HMGCS1Q01581 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCS1Q01581 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 CYP2T1P-201ENST00000432607 1285 ntBASIC19.27■□□□□ 0.68
HMGCS1Q01581 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HMGCS1Q01581 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCS1Q01581 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGCS1Q01581 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGCS1Q01581 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGCS1Q01581 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 PTBP1P-201ENST00000554374 1601 ntBASIC19.26■□□□□ 0.67
HMGCS1Q01581 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 AC100791.3-201ENST00000617619 330 ntBASIC19.26■□□□□ 0.67
HMGCS1Q01581 AC092437.1-201ENST00000624794 1048 ntBASIC19.26■□□□□ 0.67
HMGCS1Q01581 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCS1Q01581 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCS1Q01581 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCS1Q01581 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCS1Q01581 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.25■□□□□ 0.67
HMGCS1Q01581 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 AL355472.2-201ENST00000422958 438 ntBASIC19.25■□□□□ 0.67
HMGCS1Q01581 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCS1Q01581 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCS1Q01581 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms