Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.51■■□□□ 1.35
HTRA3P83110 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTRA3P83110 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.51■■□□□ 1.35
HTRA3P83110 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTRA3P83110 ZNF444P1-201ENST00000559497 298 ntBASIC23.51■■□□□ 1.35
HTRA3P83110 AL031432.5-201ENST00000641059 760 ntBASIC23.51■■□□□ 1.35
HTRA3P83110 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HTRA3P83110 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.51■■□□□ 1.35
HTRA3P83110 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.5■■□□□ 1.35
HTRA3P83110 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.5■■□□□ 1.35
HTRA3P83110 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.5■■□□□ 1.35
HTRA3P83110 AC112907.2-201ENST00000448639 330 ntBASIC23.5■■□□□ 1.35
HTRA3P83110 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.5■■□□□ 1.35
HTRA3P83110 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
HTRA3P83110 AC092329.2-201ENST00000598402 547 ntBASIC23.5■■□□□ 1.35
HTRA3P83110 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.5■■□□□ 1.35
HTRA3P83110 AL445675.2-201ENST00000620291 557 ntBASIC23.5■■□□□ 1.35
HTRA3P83110 AC010542.4-201ENST00000563151 1910 ntBASIC23.5■■□□□ 1.35
HTRA3P83110 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.5■■□□□ 1.35
HTRA3P83110 AC022898.2-201ENST00000616822 1312 ntBASIC23.5■■□□□ 1.35
HTRA3P83110 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
HTRA3P83110 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
HTRA3P83110 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.5■■□□□ 1.35
HTRA3P83110 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
HTRA3P83110 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
HTRA3P83110 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
HTRA3P83110 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.49■■□□□ 1.35
HTRA3P83110 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.49■■□□□ 1.35
HTRA3P83110 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
HTRA3P83110 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 CCR12P-201ENST00000446203 998 ntBASIC23.49■■□□□ 1.35
HTRA3P83110 AC079781.3-201ENST00000449110 356 ntBASIC23.49■■□□□ 1.35
HTRA3P83110 IFNL4P1-201ENST00000607083 540 ntBASIC23.49■■□□□ 1.35
HTRA3P83110 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.49■■□□□ 1.35
HTRA3P83110 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTRA3P83110 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
HTRA3P83110 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.48■■□□□ 1.35
HTRA3P83110 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
HTRA3P83110 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTRA3P83110 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTRA3P83110 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTRA3P83110 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTRA3P83110 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.48■■□□□ 1.35
HTRA3P83110 AC004980.1-204ENST00000429707 299 ntBASIC23.48■■□□□ 1.35
HTRA3P83110 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.48■■□□□ 1.35
HTRA3P83110 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
HTRA3P83110 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.48■■□□□ 1.35
HTRA3P83110 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
HTRA3P83110 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HTRA3P83110 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
HTRA3P83110 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
HTRA3P83110 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
HTRA3P83110 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.47■■□□□ 1.35
HTRA3P83110 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.47■■□□□ 1.35
HTRA3P83110 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 AC023632.3-201ENST00000521633 145 ntBASIC23.47■■□□□ 1.35
HTRA3P83110 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.47■■□□□ 1.35
HTRA3P83110 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HTRA3P83110 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTRA3P83110 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HTRA3P83110 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.46■■□□□ 1.35
HTRA3P83110 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HTRA3P83110 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HTRA3P83110 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
HTRA3P83110 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HTRA3P83110 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.46■■□□□ 1.35
HTRA3P83110 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.46■■□□□ 1.35
HTRA3P83110 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.46■■□□□ 1.35
HTRA3P83110 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
HTRA3P83110 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HTRA3P83110 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HTRA3P83110 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HTRA3P83110 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HTRA3P83110 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
HTRA3P83110 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
HTRA3P83110 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HTRA3P83110 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HTRA3P83110 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms