Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AF106564.1-201ENST00000607058 2553 ntBASIC17.61■□□□□ 0.41
NKX6-1P78426 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NKX6-1P78426 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.61■□□□□ 0.41
NKX6-1P78426 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
NKX6-1P78426 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 PNMA6B-201ENST00000538162 1200 ntBASIC17.61■□□□□ 0.41
NKX6-1P78426 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.61■□□□□ 0.41
NKX6-1P78426 RN7SL471P-201ENST00000580476 299 ntBASIC17.61■□□□□ 0.41
NKX6-1P78426 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.61■□□□□ 0.41
NKX6-1P78426 AC105020.6-201ENST00000621523 1217 ntBASIC17.61■□□□□ 0.41
NKX6-1P78426 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NKX6-1P78426 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX6-1P78426 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NKX6-1P78426 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-1P78426 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
NKX6-1P78426 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX6-1P78426 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX6-1P78426 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 PGM5P4-201ENST00000421970 445 ntBASIC17.6■□□□□ 0.41
NKX6-1P78426 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX6-1P78426 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.6■□□□□ 0.41
NKX6-1P78426 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.6■□□□□ 0.41
NKX6-1P78426 LINC01023-201ENST00000606054 436 ntBASIC17.6■□□□□ 0.41
NKX6-1P78426 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NKX6-1P78426 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NKX6-1P78426 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.6■□□□□ 0.41
NKX6-1P78426 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX6-1P78426 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 AC092368.3-202ENST00000574180 1591 ntBASIC17.6■□□□□ 0.41
NKX6-1P78426 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NKX6-1P78426 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-1P78426 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX6-1P78426 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NKX6-1P78426 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 AC027702.1-201ENST00000563810 1770 ntBASIC17.59■□□□□ 0.41
NKX6-1P78426 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 AC010331.1-201ENST00000611423 582 ntBASIC17.59■□□□□ 0.41
NKX6-1P78426 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NKX6-1P78426 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-1P78426 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-1P78426 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.58■□□□□ 0.41
NKX6-1P78426 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-1P78426 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-1P78426 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-1P78426 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NKX6-1P78426 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-1P78426 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-1P78426 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-1P78426 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NKX6-1P78426 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-1P78426 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX6-1P78426 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX6-1P78426 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX6-1P78426 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.57■□□□□ 0.4
NKX6-1P78426 AL356652.1-201ENST00000615962 565 ntBASIC17.57■□□□□ 0.4
NKX6-1P78426 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms